###Galileo Jupiter Plasma Wave Science Electron Density Derived Data Bundle

####Galileo PWS Electron Density Data Collection

      PDS3 DATA SET ID               = GO-J-PWS-5-DDR-PLASMA-DENSITY-FULL-V1.0
      PDS3 DATA SET NAME             = GALILEO JUPITER PWS DERIVED PLASMA DENSITY FULL RES V1.0
      START TIME                     = 1996-05-25
      STOP TIME                      = 2002-11-06
      ORIGINAL DATA SET RELEASE_DATE = 2017-03-17
      PRODUCER FULL_NAME             = WILLIAM S. KURTH

#####References

Data were originally archived in the following PDS3 data set:

*  [GO-J-PWS-5-DDR-PLASMA-DENSITY-FULL-V1.0](https://doi.org/10.17189/1519684)

PDS3 Volume: GOPW_2001

Original PDS3 data were derived from the low rate science (LRS) survey products from
the Galileo PWS instrument which have been published under the PDS3 data set
identifier,

*   [GO-J-PWS-2-REDR-RTS-SA-FULL-V1.0](https://doi.org/10.17189/1519682)
   
which was released on volume GO_0068.

Furthermore, the magnitude of the magnetic field determines many of the
characteristic plasma frequencies included within these data. Thus the
magnetometer PDS3 data set,

*   [GO-J-MAG-3-RDR-MAGSPHERIC-SURVEY-V1.0](https://doi.org/10.17189/1519668)
  
which was released on volume GOMAG_9002 is a natural companion to the original
PDS3 volume.


***

####Collection Overview

This collection consists of ASCII formatted characteristic frequency and
electron plasma density measurements as determined from the Galileo
Plasma Wave Science (PWS) instrument spectrum data and calculated from
the equations of cold plasma theory.  All measurements collected for this
collection originate with the 152-channel low rate survey electric spectra.
This is a whole mission archive in that coverage for this collection is
simply all times for which plasma density measurements from the
Galileo PWS are available when it is in the vicinity of Jupiter.

Individual records are gathered into daily files by spacecraft event
time (SCET).  When well characterized emissions are present in the
survey spectra the data rate is one point per electric spectrum, which
works out to one point every 18.7 seconds, or one point every 37.3
seconds depending on the instrument's operating mode.  During times
when emissions could not be characterized no density measurements are
provided.

####Parameters

While the data essential to this collection are the electron plasma densities,
there are a number of other plasma parameters included within these
records.  The collection consists of PDS SPREADSHEET objects with one record
per time step.  The time step is not fixed but varies depending on the
measurement method (field 12).

Each record begins with the following space and time location parameters
in fields 1 through 10:

   1. The spacecraft event time (SCET)
   2. Spacecraft radial distance from the center of Jupiter
   3. Spacecraft Jovigraphic west longitude
   4. Spacecraft Jovigraphic local time
   5. Spacecraft latitude
   6. Spacecraft magnetic local time
   7. Spacecraft magnetic latitude
   8. Spacecraft Jupiter Solar Ecliptic coordinates, X
   9. Spacecraft Jupiter Solar Ecliptic coordinates, Y
  10. Spacecraft Jupiter Solar Ecliptic coordinates, Z

If available, each record includes the following MAG instrument data
in field 11.  If MAG data are not available for the given spacecraft
event time, then this field is empty:

  11. The electron cyclotron frequency, fCE

Each data product record contains measurement methods and results in
fields 12 through 16:

  12. The measurement method (line-plots, spectrograms, or
      spectrograms with algorithm-assist)
  13. The measured frequency value
  14. A quality flag for the measurement clairity
  15. The name of the measured frequency (fPE, fR=0, fL=0, fUH)
  16. An indicator for measurements made in the solar wind

Each record contains the resulting characteristic cold-plasma
frequencies in fields 16 through 19.  Not all frequencies are present
for each record, as fields 18, 19 and 20 depend on fCE:

  17. The electron plasma frequency, fPE
  18. The ordinary mode cutoff frequency, fL=0
  19. The extraordinary mode cutoff frequency, fR=0
  20. The upper hybrid resonance frequency, fUH

Finally, each record contains the corresponding electron plasma number
density in field 21:

  21. The calculated electron density, Ne

Of the four plasma frequencies (fields 17-20), one is a copy of the
measured cutoff or resonance (field 13),  while the remaining frequencies
are calculated using static magnetic field magnitude and the equations of
cold plasma theory as described in Barnhard et al, 2009. Again, data from
the Galileo magnetometer are not always available. During these times
fCE, fUH, fR=0 and fL=0 are not present.

More detailed definition of data records and field definitions are
supplied in the product labels that accompany each data product file
in this collection.  All data products have the same format.


####Processing

The data in this collection were derived from measuring either plasma electron
frequency cutoff (fPE), the Z-mode cutoff (fL=0), or the upper hybrid
resonance (fUH).  They were produced over a multi-year period by three
different investigators; Ansher, Richards, and Barnhart, working under the
direction of D. A. Gurnett (Ansher, Richards) and W.S. Kurth (Barnhart).

Ansher's data collection measured the cutoff in continuum radiation in
regions where fPE > fCE. Richards continued Ansher's work marking
continuum cutoff's and in addition added measurements of fUH peaks when
present.  Both investigators were assisted by technicians who marked
cutoffs or peaks in individual spectra, one line plot at a time.  Ansher's
proceedure and methods are provided in chapter three of the document
ANSHER_2001.PDF while Richard's are available section 2.1 of the document
RICHARDS_2006.PDF.  Both documents are available in the DOCUMENT directory
of this bundle.

Utilizing new software tools, Barnhart extended the bundle to include
times when fPE < fCE by considering cutoffs and peaks in Z-mode
emissions, and revised some previous measurements by designating them
as Z-mode emissions.  The newer tools at his disposal presented a time-
frequency-amplitude color spectrogram to the user and thus required much
less manual labor.  The methods he used to review and extend frequency
measurements on this collection are very similar to those employed to generate
the data on PDS3 volume VGPW_0201 and are given in the included document,
BARNHART_2009.PDF.  Most of the following processing narrative is from
the point of view of the last investigator to determine plasma densities
from PWS spectra, Barnhart, though in fact this is a combined work.

---

The ASCII density data files produced in this collection were derived
from measuring the characteristic frequencies from the local plasma.
The density was calculated from these data, along with cyclotron
frequency data derived from magnetic field data, using the equations
of cold plasma theory as described in Barnhard et al, 2009. Since the
electron plasma frequency fPE, is directly proportional to the electron
number density, plasma wave science instrument data alone are sufficient
to determine densities when these cutoffs are apparent in the wave
spectra.  For all other digitized frequencies MAG instrument data were
required to calculate the electron density.

In order to measure these characteristic frequencies, this effort
utilizes a new program that allows the operator to highlight the
general vicinity of the cutoff or resonance on a frequency-time
spectrogram.  Then, an algorithm finds the cutoff or resonance in
the region and records the frequency at 1 second intervals.  Hence,
the automated procedure has a high temporal resolution (18.7 second)
and requires a relatively low level of both manual effort and
subjective judgment by the operator.

There are two different algorithms used: one for cutoff detection
and one for resonance or peak detection. The cutoff detection
algorithm is controlled by a small number of parameters that can
be set by the operator.  The first parameter is the cutoff level.
In determining possible cutoff candidates, the algorithm scans the
region highlighted by the operator and records two separate points,
one above the cutoff level and one below.  The closer the two points
are, temporally, the steeper the slope will be.  Therefore, the
operator can change the location of the cutoff level to manipulate
where the algorithm looks for cutoffs within the highlighted region
of interest.  The next parameter is the slope magnitude, which
designates the minimum magnitude of the finite difference slope
where the cutoff must reside.  The operator may raise the slope
level in order to scan only for sharp cutoffs, or lower it in order
to accommodate less steep slopes, depending on the quality of the
spectrum data.  When there is more than one possible cutoff, the
detection program will display them as cutoff candidates.  The
cutoff level, slope magnitude and cutoff candidates are displayed by
the program for viewing by the operator.  While the algorithm
chooses the lowest frequency cutoff by default, the operator may
override the algorithm and choose any of the possible cutoffs to be
recorded.

While most of the characteristic frequencies are, by definition,
the cutoff of propagating wave modes, there are certain
circumstances when the characteristic frequency is denoted as the
peak of a wave mode in the spectrum.  Because of this, there is an
algorithm specifically for resonance or peak detection.  Many
spectra of interest to this study include Z-mode radiation, which
has a low-frequency cutoff at fL=0.  Barbosa et al, 1990 B
demonstrated that taking the peak of the Z-mode
as fL=0 yields the highest consistency in the determination of
fpe.  Hence, when the Z-mode is enhanced, we utilize the peak
detection algorithm to identify fL=0 from which fpe and the
electron density can be derived.  This algorithm can also be used
to determine fUH when an enhancement at that frequency is present
in the spectrum.  In order to measure this resonance or spectral
peak, the peak detection algorithm fits a Gaussian curve to the
highest peak within the region specified by the program operator.
The algorithm then records the frequency of the Gaussian's peak
as the peak frequency in the spectrum.  The algorithm displays
the spectrum and a darker line which is the Gaussian.  Because
there may be noise which exhibits a large peak in the highlighted
spectrum, the spectrum is displayed along with the Gaussian curve
and a vertical line designating where the peak was measured.
The operator always has the ability to manually change the peak's
location and alter the measurement in such cases.

While the operator utilizes a color spectrogram to guide the cutoff
and peak detectors, we emphasize that this is only used as a means
of identifying the appropriate range in frequency for the algorithm
to search. The direct use of color spectrograms tends to mislead
an operator to perceive a cutoff that is not equivalent to the
cutoff in the actual power spectrum Barbosa et al, 1990 B. Because
this may lead to a systematic error in the data, the algorithm
utilizes the spectrum itself, and does not depend on a color scale
to determine the characteristic frequencies. This should reduce
systematic error and lead to more accurate results.


####Data Coverage

This collection does not provide complete coverage of the time
intervals when Galileo was within Jupiter's magnetosphere. Two
criteria were necessary in order for density measurements to be
obtained.  First, plasma wave data must exist.  Because of the failure
of Galileo's high gain antenna, there are many intervals for which there
are no plasma wave data.  Second, a suitable feature must be present in
the spectrum which can reliably be used to identify a characteristic
frequency of the plasma related to the electron density, such as fPE,
fUH, or fL=0.

By far the most prevalent emission of use is the non-thermal continuum
radiation, whose low frequency cutoff is at fPE.  This radiation
literally fills the magnetosphere between the magnetopause and higher
density regions of the inner magnetosphere, typically beyond 25 RJ
(see illustration DOCUMENTS/A_D79_358_1.PNG).  However, some regions
include other emissions and regions when the plasma frequency does not
have a clear cutoff.  If the plasma frequency is not measured directly
from the spectrum for any reason, it may be calculated from the local
magnetic field data (essentially fCE) and one of three other
characteristic frequencies using the equations of cold plasma theory.
Thus, magnetic field data must  exist for regions when fPE is not
present, or the electron density cannot be calculated.  Typically,
continuum radiation is not present inside of approximately 20 to 25
Jovian radii.  Data exists typically from approximately 20 to 65 Jovian
radii.  Inside of about 10 RJ there is often a narrow band feature at
fUH which, when fCE is available, can provide fPE.

####Interpretations

Low rate science survey data were used to measure characteristic
frequencies (peaks and cutoffs) which relate to the electron plasma
density.  When dealing with a variety of spectrograms and plasma
conditions found in different regions of the Jovian magnetosphere, it
is necessary to interpret the present modes and characteristic
frequencies correctly in order to determine the most accurate value
for the electron plasma density.  Below, we will briefly discuss the
methods used for interpreting different spectra.

The simplest spectra to interpret for the purposes of determining
the electron plasma density are those that include non-thermal
continuum radiation with a clear low frequency cutoff and with no
other emissions obscuring the cutoff.  For the purposes of this
collection, we agree with the Gurnett et al. interpretation
that based upon spectra data it is appropriate to assume that the
continuum radiation cutoff is fPE and we can accurately determine
the local electron plasma density using the appropriate equation
from cold plasma theory.  The electron plasma density is directly
proportional to the square of the electron plasma frequency and
therefore in this case the determination of the density does not
depend on magnetic field measurements.  When there is only one
cutoff present in the continuum radiation, we assume that the
continuum radiation is propagating in the ordinary mode and that
the cutoff is indeed the plasma frequency.  An alternate possibility
would be to identify this cutoff as the fR=0 cutoff at fR=0.  But,
most theories Shaw and Gurnett, 1980; Moses et. al., 1987;
Barbosa et al., 1990 favor the L,O mode as the most likely
continuum radiation component, hence, we assume that there is always
at least some L,O component present when the continuum radiation is
detected.

Sometimes, more than one wave mode cutoff is present at different
frequencies for the same time period.  When this is the case, one
way to resolve the ambiguity is to use a guess-and-check system as
follows:

1. Assume that one frequency cutoff/peak present in the spectrum is
   a particular characteristic frequency.

2. Use the local magnetic field data (which determines fCE) along
   with the equations from cold plasma theory to calculate the
   remaining characteristic frequencies.

3. Look for consistency between the calculated frequencies and the
   remaining spectral features (cutoffs/peaks) present.

A consistent interpretation is one where the calculated frequencies
match the cutoffs/peaks present in the spectrum.  In some examples
there exist two spectral cutoffs which need identification in order
to calculate the electron plasma density.  By using a Consistency
Check, (mainly, assuming fPE is the lower cutoff and calculating the
remaining characteristic frequencies) it is found that when the
plasma frequency is assumed to be the lower frequency cutoff, the
cutoff at higher frequencies matches the calculated R=0 frequency.

The guess-and-check system was used by Barnhard et al, 2009 with Voyager
wide band waveform observations that have significantly higher spectral
resolution that do the Galileo survey data used here.  Hence, it is
less likely that the Galileo spectral resolution will allow the routine
use of guess-and-check.

In addition to the non-thermal continuum radiation with a low
frequency cutoff at fPE, another mode of propagating waves (called
Z-mode) is sometimes also present.  Based upon results from our
consistency checks and in agreement with the previous work of
Barbosa et. al, 1990, we conclude that there are two types of
Z-mode radiation: weak, broadband Z-mode and intense, narrow band
Z-mode. We interpret the L=0 frequency as the cutoff of the weak,
broadband radiation, however, when the Z-mode emission becomes
intense we have found that taking the L=0 frequency as the peak of
the intense emission gives the most consistent estimate for fL=0.
This is because as the intensity of this peak increases, the width
of the emission appears to broaden due to limitations in the Fourier
transform.  Barbosa et al, 1990 demonstrated that taking the peak
of the Z-mode as fL=0 yields the highest consistency in the
determination of fPE, which concurs with our consistency checks.
Thus, in regions where Z-mode is present, we can determine the
electron density by either measuring the cutoff of the broadband
Z-mode as fL=0 or the peak of the narrow band intense Z-mode as fL=0,
and using the equations of cold plasma theory.

When Galileo approaches the lobe of the magnetosphere, the density as
well as fPE drops precipitously and approaches or even drops below
the cyclotron frequency.  Perraut et al. studied one such case obtained
by the Galileo plasma wave instrument. In order to determine the proper
identification of the characteristic frequencies and determine the electron
plasma density, we utilize our previous consistency check method. When an
interpretation is found to be consistent with the spectrum, we assume temporal
continuity of the cutoffs, and extend the interpretation into
regions where a consistency check is not possible due to lack of
features in the spectrum or a lack of magnetic field data.  While
there is no method for determining the density with certainty in these
regions, we believe that assuming that the spectrum does not change
greatly in a span on the order of minutes is appropriate and
suitable to determine the density.

Through an extensive analysis of Galileo spectra, there exist three
possibilities for the interpretation of the low frequency cutoff
of the emissions in the lobe.  One interpretation, adopted by
Perraut et al. is to label the low frequency cutoff as the electron
plasma frequency. This investigation has found numerous time periods
when this interpretation is consistent with the spectrum, meaning that
the other (calculated) frequencies match features present in the spectra.
However, there are also a number of time regions where labeling the low
frequency cutoff as the L=0 frequency gives calculated frequency values
which match the features in the spectrum.

Also, there are regions when interpreting the low frequency cutoff
as either fPE or fL=0 does not give calculated frequencies which
are consistent with the spectrum.  This ambiguity when
interpreting spectra cannot be removed at this time, however, we
have attempted to systematically evaluate each time region.


####Coordinate System

Included in this collection are two coordinate systems that ensure an
accurate location of the density data points.  The first system of
coordinates consists of distance, longitude and magnetic latitude
and is referred to commonly as the Jovigraphic coordinate system,
or one that is fixed to the rotation of the planet. We have used the
System III Jovigraphic coordinate system which uses the planet's
magnetic field to measure the rotation. The radial distance is
defined as the distance from the center of Jupiter to the spacecraft
(in kilometers) divided by the radius of Jupiter at the equator
(71492km).  In the usual astronomical convention, the longitude is
a west longitude which increases with time from an observer above
the system, rather than just the angle of rotation about the z-axis.

The other coordinate system included is referred to as the
Jovicentric Solar Ecliptic (JSE) system. This rotating coordinate
system has its x-axis point from Jupiter toward the Sun, and its
y-axis is chosen to be in the ecliptic plane pointing toward dusk
(thus opposing planetary motion). Its z-axis is parallel to the
ecliptic pole. All X, Y, and Z coordinates are measured in Jovian
radii (1 Rj = 71492km).


####Software

No software is included with this bundle, instead files are formatted
as ASCII spreadsheet and contain data calibrated into physical units.
Archive users should be able to work with this bundle without
specialized software.


####Media/Format

This bundle was delivered 'on-line' as individual ASCII encoded
text files with the exception of the browse plots, which are encoded
in PNG (portable network graphic) format.


####Confidence Level Overview

There are two important caveats for potential users of these data to
consider.

First, this collection was compiled through and shortly after the end of the
Galileo mission. The individuals who did the majority of the work are no
longer available. A thorough examination of all of the data, comparing
the digitized frequency with the plasma wave spectrum needs to be carried
out.

Second, subsequent to the work on this collection, a detailed examination of
Voyager wideband spectrogram data was carried out. The Voyager exercise was
useful in that it implemented the 'guess-and-check' method described above.
Some effort was made to apply this to the Galileo data, but the lower spectral
resolution of the Galileo survey data means that the technique is less useful.

In short, this collection may suffer from improper spectral interpretation
and care should be used to consider whether the results are reasonable, or
not.

In order to determine the density, we used an analysis tool that  measured
characteristic frequencies within Galileo plasma wave spectra. This
frequency detection tool contained both a cutoff and peak detection
algorithm which could measure either the cutoff or the peak of a spectrum,
respectively.  For this investigation, only the cutoff algorithm was used.
Peak detection was made by-hand, meaning an operator manually labeled
spectrum peaks from individual line plots.  A confidence level was
recorded for the measured frequency whether it was determined by the
algorithm or was digitized manually.

In order to record the confidence of the frequency measurements, data
quality indices were given to each data point.  The indices range from
0 to 3 with 0 being a cutoff with the highest confidence and 3 being
the least. The amount of noise in the spectrum dictates the quality
rating given to a particular data point.  Points with a minimal amount
of noise are given values of 0, whereas points where the spectral noise
is so great that the cutoff is unclear are given a 1 or 2 index
depending on the severity of the noise.  A data quality index of 3 is
given when there are obstructions in the spectrum blocking the ability
for an accurate measurement, or when there is such a significant amount
of background spectral noise that the spectra must be time-averaged
over a longer period of time in order to interpret the cutoff.

A data quality index of 's' was used for regions when Galileo was
outside the magnetosphere and within the solar wind. The calculated
densities are technically not magnetospheric densities but are
included in this collection and may be useful for some end-users.


####Limitations

Since the low rate electric survey data are collected via sweep frequency
spectrum analyzers, the spacing between the frequency bins in the
receivers represents the ultimate accuracy with which a cutoff can be
determined. This spacing is not linear but instead increases with increasing
channel center frequency. For example the lowest bands of the SFR
(Sweep Frequency Receiver) are separated by about 3.4 Hz, while the upper bands
of the HFR (High Frequency Receiver) are separated by over 400,000 Hz. At any given
frequency, the accuracy of a measured cut-off or peak is only known up
to the frequency discrimination capability of the receivers themselves.

Because the electron density is proportional to the square of the plasma
frequency, the uncertainty in the density expressed as a percentage, is
twice the spectral resolution delta-f/f expressed as a percentage.

It is important to note that if the plasma frequency is not present
in the spectrum, the electron plasma density must be calculated
using another characteristic frequency and the cyclotron frequency,
which is directly proportional to the local magnetic field.  If
magnetic field data do not exist for a region where the plasma
frequency cannot be measured, the density can not be determined.

There are a small number of regions containing anomalous magnetic
field data which may affect the density calculation.  These magnetic
field dropouts are sharp, momentary decreases or increases in the
magnetic field which are instrumental effects and do not represent
realistic occurrences.  They are characterized by a magnetic fluctuation
of several orders of magnitude in a span of less than one minute.
Regions of anomalous magnetic field data which affected density
measurements were changed manually from their anomalous values to the
floater value -1 and the subsequent frequency and density calculations
were changed appropriately.

#####Citation

Ansher, J.A., Barnhardt, B.L., Richards, B.H., Gurnett, D.A., Kurth, W.S.
